##FastQC	0.10.0
>>Basic Statistics	pass
#Measure	Value	
Filename	lane4_Index14_1.fq	
File type	Conventional base calls	
Encoding	Illumina 1.5	
Total Sequences	23274863	
Filtered Sequences	0	
Sequence length	90	
%GC	49	
>>END_MODULE
>>Per base sequence quality	pass
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	32.21773756520071	33.0	31.0	34.0	31.0	34.0
2	32.44859516466327	34.0	31.0	34.0	31.0	34.0
3	32.45737416370614	34.0	31.0	34.0	31.0	34.0
4	36.099883294694365	37.0	35.0	37.0	35.0	37.0
5	35.99526802800085	37.0	35.0	37.0	35.0	37.0
6	35.97705846861483	37.0	35.0	37.0	35.0	37.0
7	35.96659284310288	37.0	35.0	37.0	35.0	37.0
8	35.931694119961094	37.0	35.0	37.0	35.0	37.0
9	37.635760433906746	39.0	37.0	39.0	35.0	39.0
10-14	37.87635012932192	39.2	37.2	39.4	35.0	39.4
15-19	38.83627141435805	40.0	38.0	41.0	35.0	41.0
20-24	38.65957399620354	40.0	38.0	41.0	34.2	41.0
25-29	38.329618893997356	40.0	38.0	41.0	33.8	41.0
30-34	38.29769813897508	40.0	38.0	41.0	33.8	41.0
35-39	38.02034021854393	40.0	37.4	41.0	33.0	41.0
40-44	37.92921450063959	40.0	37.0	41.0	33.0	41.0
45-49	37.5774170786741	39.6	36.4	41.0	32.4	41.0
50-54	36.98578856511422	39.0	35.0	40.8	31.0	41.0
55-59	36.307447584116815	38.0	34.8	40.0	30.4	41.0
60-64	35.49367828287539	36.8	34.0	39.8	29.2	41.0
65-69	34.57599056114744	35.4	33.4	39.0	28.4	40.6
70-74	33.5051552140178	35.0	32.6	37.4	26.4	39.6
75-79	32.458732633571245	34.6	31.6	36.2	26.0	38.8
80-84	31.834997052399405	34.4	31.6	35.0	25.0	37.0
85-89	30.61253000715837	34.0	31.0	35.0	20.8	36.0
90	29.578704759722967	34.0	30.0	35.0	2.0	35.0
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
11	14.0
12	119.0
13	1009.0
14	4690.0
15	11780.0
16	21425.0
17	30408.0
18	39180.0
19	47590.0
20	58001.0
21	68811.0
22	79608.0
23	94758.0
24	115551.0
25	143491.0
26	183550.0
27	236729.0
28	304158.0
29	387808.0
30	489755.0
31	615405.0
32	778766.0
33	1005951.0
34	1370475.0
35	1986202.0
36	3085575.0
37	4534767.0
38	5037335.0
39	2506899.0
40	35053.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	26.244484970286447	12.995518767337998	10.493389238163763	50.266607024211794
2	22.28139835004094	19.39646969647925	35.396416220449176	22.925715733030636
3	25.538637971789562	21.65942287179091	23.112445387970702	29.68949376844882
4	27.591230075124397	28.03083309233657	19.609503179460177	24.768433653078862
5	29.250747738181687	30.00904237525316	21.47612243219701	19.26408745436814
6	24.050289791179434	32.98443475263421	21.82322190253064	21.142053553655717
7	21.346841010406806	18.833949742260568	37.68951937547387	22.12968987185875
8	21.541372767693627	22.103949655901303	29.174268394189905	27.180409182215165
9	21.57926772759092	20.99496353641265	31.603056052360007	25.822712683636418
10-14	24.601635678800772	26.272135737168462	24.715806920109475	24.410421663921287
15-19	24.976708133577414	25.140258827731877	25.14325605267795	24.739776986012764
20-24	24.745714934998457	25.400793340014875	25.453400309625025	24.40009141536164
25-29	24.670898590026464	25.41049984271299	25.372065751743904	24.546535815516638
30-34	24.69025232558828	25.341149884332953	25.33087940632787	24.637718383750894
35-39	24.71840773349055	25.46351139270574	25.288609102283537	24.529471771520175
40-44	24.658504504942062	25.30562476401909	25.44308297276559	24.59278775827326
45-49	24.61278107030771	25.36340124359996	25.369098514545303	24.65471917154703
50-54	24.635476637763905	25.434624083191913	25.40846796358336	24.521431315460823
55-59	24.66772120340586	25.374363421126578	25.355194634932843	24.602720740534714
60-64	24.576811188615054	25.400223258923088	25.456152276100557	24.5668132763613
65-69	24.603164359813277	25.510072030539405	25.432358103274566	24.45440550637276
70-74	24.666998257942723	25.42909761570519	25.36107041651256	24.542833709839528
75-79	24.623964526675284	25.4058779762672	25.422640752842273	24.54751674421524
80-84	24.56644679378587	25.54049412200908	25.436392337967085	24.456666746237975
85-89	24.65485603474918	25.519606092096907	25.328691321586007	24.49684655156791
90	24.378479981053985	25.60838120536112	25.5327793205214	24.480359493063496
>>END_MODULE
>>Per base GC content	fail
#Base	%GC
1	76.51109199449823
2	45.20711408307157
3	55.22813174023838
4	52.35966372820325
5	48.51483519254983
6	45.19234334483516
7	43.47653088226556
8	48.721781949908795
9	47.40198041122734
10-14	49.01205734272206
15-19	49.716485119590175
20-24	49.1458063503601
25-29	49.2174344055431
30-34	49.327970709339176
35-39	49.24787950501072
40-44	49.251292263215326
45-49	49.26750024185474
50-54	49.156907953224724
55-59	49.27044194394058
60-64	49.143624464976355
65-69	49.057569866186036
70-74	49.20983196778225
75-79	49.171481270890524
80-84	49.02311354002384
85-89	49.151702586317086
90	48.85883947411748
>>END_MODULE
>>Per sequence GC content	pass
#GC Content	Count
0	3.0
1	3.0
2	3.0
3	3.5
4	5.0
5	6.0
6	10.0
7	16.5
8	26.0
9	52.0
10	71.0
11	95.5
12	155.5
13	241.0
14	406.0
15	662.0
16	1198.5
17	2058.0
18	3491.0
19	6287.0
20	8114.0
21	11089.5
22	18892.0
23	30543.5
24	47020.5
25	69437.5
26	98035.0
27	133831.5
28	173356.5
29	214783.5
30	236649.0
31	260382.0
32	308479.5
33	359490.5
34	413885.0
35	467892.5
36	523794.5
37	585082.5
38	637078.5
39	680374.0
40	703319.0
41	719015.5
42	749136.5
43	775072.5
44	791613.0
45	800137.5
46	801402.0
47	795369.0
48	793231.0
49	795288.0
50	795681.0
51	788051.5
52	779956.0
53	769708.5
54	764897.0
55	764461.5
56	752092.5
57	736125.5
58	712344.0
59	682341.5
60	667117.0
61	648448.5
62	608187.5
63	559460.0
64	503204.0
65	446013.5
66	385583.0
67	323303.0
68	267737.0
69	214883.0
70	187676.0
71	164257.5
72	121087.5
73	85551.0
74	56485.5
75	34202.0
76	19525.0
77	10268.0
78	4758.0
79	1986.5
80	1142.0
81	822.5
82	355.5
83	148.0
84	70.5
85	44.5
86	24.5
87	10.5
88	9.5
89	11.0
90	11.0
91	7.5
92	3.5
93	1.5
94	0.0
95	0.5
96	0.5
97	0.0
98	0.0
99	0.0
100	0.0
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.17552842308889208
2	0.05200460256200004
3	0.0
4	0.0
5	2.1482403569894268E-5
6	0.0
7	0.0
8	0.0
9	0.0
10-14	0.0
15-19	0.0
20-24	8.592961427957708E-7
25-29	9.168689843630874E-4
30-34	0.001660160147881429
35-39	0.0036073252074566454
40-44	0.0031561947324888658
45-49	0.00241376286511332
50-54	0.01315754253848884
55-59	0.0024369638609688057
60-64	1.6326626713119642E-5
65-69	5.5854249281725095E-5
70-74	0.005288967758907969
75-79	0.0029035616665069094
80-84	6.092409652422014E-4
85-89	7.905524513721091E-4
90	0.0013362055020474234
>>END_MODULE
>>Sequence Length Distribution	pass
#Length	Count
90	2.3274863E7
>>END_MODULE
>>Sequence Duplication Levels	fail
#Total Duplicate Percentage	54.55854219405206
#Duplication Level	Relative count
1	100.0
2	31.77266058557122
3	16.817630924283982
4	10.461185175735153
5	7.276051965724735
6	5.300759073802386
7	4.141948927303268
8	3.1745019242627204
9	2.7024728370649145
10++	30.978503540218153
>>END_MODULE
>>Overrepresented sequences	pass
>>END_MODULE
>>Kmer Content	warn
#Sequence	Count	Obs/Exp Overall	Obs/Exp Max	Max Obs/Exp Position
AAAAA	5982405	2.931069	5.1065536	2
CCAGG	4878610	2.5922053	5.214363	1
CCTGG	4893105	2.5853014	6.058509	1
GAAGA	4968645	2.551709	5.2369075	2
CTTCT	5085900	2.5348852	5.381819	1
AAGAA	4999915	2.5080392	5.074092	2
CTGGA	4716585	2.44999	8.541122	1
TCCAG	4592365	2.3699632	5.3228235	2
CTCCT	4535930	2.3125625	6.844032	1
CTGGG	4292700	2.2829094	8.082187	1
CAGGA	4274360	2.2328234	5.462037	1
CTTCA	4379450	2.1951118	5.576603	1
CTCCA	4270340	2.189456	7.245945	1
CCCAG	4145640	2.188434	6.9087453	1
CAGAA	4117835	2.1010222	5.0810204	1
CTCTG	3995935	2.0505812	6.1386604	1
CTGGC	3555035	1.8783243	5.11608	1
TGGAA	3637100	1.8573846	5.091713	2
CTGAA	3652915	1.8533385	5.401655	1
CTCAG	3384965	1.7468652	5.9509416	1
CTTTG	3397115	1.7042456	5.035218	1
CTTGG	3159345	1.6318759	5.283088	1
>>END_MODULE
